Circwave v1.4 software
WebCircWave software (v 1.4, 2007 R. Hut) uses Fourier transformation to recognise wave forms and adds harmonics in a step-wise regression using cosinor analysis and F-testing …
Circwave v1.4 software
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WebJun 20, 2013 · Cosine analysis was done using CircWave V1.4 software (Groningen, The Netherlands) to test whether there was circadian rhythm with each indicator. Survival times among groups were tested by Kaplan-Meier survival curves. The results were presented as mean ± standard deviation, and differences with P < 0.05 were considered statistically … WebJul 17, 2024 · Circadian gene expression data were tested for significant circadian rhythmicity, using CircWave v. 1.4 software (generated by Dr. Roelof Hut; …
WebFeb 23, 2024 · CircWave analysis of membrane transporters rAbcc1, rAbcc4, rAbcg2, and rOat3 mRNA circadian expression in the CPs of intact male and female rats. Absence of the CircWave curve indicates absence of significant rhythmicity as analyzed by CircWave. White and grey backgrounds represent the day and night periods, respectively. Table 1. Webusing sine curve fitting with CircWave v1.4 (Oster et al., 2006). RESULTS Synergistic Interaction of Per1 and Dec1/2 under Entrained Conditions Per1/Dec double and triple mutant mice were born at the expected Mendelian ratios—taking into account that both Dec genes are located relatively close together on the same chromosome
WebJan 13, 2014 · The relative mCRY1 protein level (open circles/dotted line) were normalized to GAPDH and plotted. mCry1 mRNA (CircWave, P = 1 × 10 −7) and mCRY1 protein (CircWave, P = 7 × 10 −7) levels between 8–36h are significantly rhythmic. (B) Cry1-3′UTR was fused to Renilla luciferase (RL-Cry1-3U). Firefly luciferase was used as an internal … WebI would like to suggest you that for the cosinor analysis purpose you will be using circwave software. In this software you should analysis your individual time point data either fitter …
WebFeb 10, 2011 · In the CircWave graphs, each dot represents the normalized relative mRNA level from the eWAT of an individual mouse. The curve represents the best-fit fourier curve, with the center of gravity (phase) represented by the vertical bar intersecting with the horizontal bar which represents the mean of the entire data set (liver; p≤0.002).
WebMay 13, 2015 · CircWave v1.4 software (www.hutlab.nl; www.euclock.org) was used to detect rhythmicity of host CC gene expression, hepanoid CC gene expression, microbial … flying in shadowlands wowheadWebJan 16, 2014 · CircWave v1.4 software (www.huttlab.nl, www.euclock.org; an extension of the Cosinor analysis, courtesy of Dr. Roelof Hut) was used to analyze the rhythmicity of gene expression by fitting a ... flying in shadowlands wow trackerWebPlot: a program to quickly look at data as either Car- tesian plots or actograms. Acro: a program to calculate the acrophase (time of peak) of circadian rhythms through a fitted … flying in shadowlands on altsWebFeb 19, 2016 · Values are based on sine wave fits generated with CircWave v1.4 software. Highlighted in bold are significant differences (p ≤0.05) between wild-type and Clock-/- … flying in shadowlands zonesWebJTK-cycle, COSOPT and CircWave are all aimed at gene expression data with relatively low sampling rates (~ 1 sample per hour or so). CircWave is an F-tested forward harmonic regression procedure ... flying inside a fighter jetWebFeb 19, 2016 · Rhythmicity and phase of qPCR clock gene expression profiles were determined using CircWave v1.4 (developed by Roelof Hut, University of Groningen, … flying in spanishWebI came across CircWave and JTK-Cycle, but I cannot seem to figure out how they work. Especially for JTK_cycle, it seems to be more suited for HT datasets. ... I recommend using LinReg software for analyzing qPCR raw data. The software is quite useful and easy to use. 1 votes 1 thanks. Badges; Science method; Similar topics; Medicine; flying in snow storm